Graphical comparison of changes in large populations with “volcano plots”

I recently rediscovered a volcano plot — a scatter plot that aims to visualize changes in large populations.

Volcano plots are very technical and specialized and, most probably, are not a good fit for explanatory data visualization. However, they can be useful during the exploration phase, and they come with a set of well-established metrics.

Moreover, if you are lucky enough to have well-behaved data, the plots look very cool

Visualization of RNA-Seq results with Volcano Plot
From here

Of course, in real life, the data is messy. Add bad visualization practices to the mess and you get a marvel like this one

From here

The bottom line: if you have two populations to compare, consider volcano plots. But do remember dataviz good practices.

By Boris Gorelik

Machine learning, data science and visualization http://gorelik.net.

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