If you know me in person or follow my blog, you know that I have a keen interest in teaching. Indeed, besides being a full-time data scientist at Automattic, I teach data visualization anywhere I can. Since I started teaching, I became much better in communication, which is one of the required skills of a good data scientist.
In my constant strive for improving what I do, I joined the Data Carpentry instructor training. Recently, I got my certification as a data carpentry instructor.
Software Carpentry (and it’s sibling project Data Carpentry) aims to teach researchers the computing skills they need to get more done in less time and with less pain. “Carpentry” instructors are volunteers who receive a pretty extensive training and who are committed to evidence-based teaching techniques. The instructor training had a powerful impact on how I approach teaching. If teaching is something that you do or plan to do, invest three hours of your life watching this video in which Greg Wilson, “Carpentries” founder, talks about evidence-based teaching and his “Carpentries” project.
I also recommend reading these papers, which provide a brief overview of some evidence-based results in teaching:
The first section in the original post is called “You’ll learn new things”. This is a universal truth. If you don’t “learn new things” every day, your professional career is stalling. Taken from the word of classification models, telling a universal truth has a very high sensitivity but very low specificity. In other words, it’s a useless waste of ink.
3. Not for developers only
The first section starts as follows: “When transitioning from a role as a developer to a position focused on data, …”. Most of the data scientists I know were never developers. I, for example, started as a pharmacist, computational chemist, and bioinformatician. I know several physicists, a historian and a math teacher who are now successful data scientists.
4. SQL skills are overrated
Another quote from the post: “Strong SQL skills are table stakes for data scientists and data engineers”. The thing is that in many cases, we use SQL mostly to retrieve data. Most of the “data scienc-y” work requires analytical tools and the flexibility that are not available in most of the SQL environments. Good familiarity with industry-standard tools and libraries are more important than knowing SQL. Statistics is way more important than knowing SQL. Julia Silge did indeed mention the tools (numpy/R) but didn’t emphasize them enough.
5. Communication importance is hard to overestimate
Again, quoting the post:
The ability to communicate effectively with people from diverse backgrounds is important.
Yes, Yes, and one thousand times Yes. Effective communication is a non-trivial task that is often overlooked by many professionals. Some people are born natural communicators. Some, like me, are not. If there’s one book that you can afford buying to improve your communication skills, I recommend buying “Trees, maps and theorems” by Jean-luc Doumont. This is a small, very expensive book that changed the way I communicate in my professional life.
6. It’s not that simple (part 2)
After giving some very general tips, Julia proceeds to suggest her readers checking out the data science jobs at StackOverflow Jobs site. The impression that’s made is that becoming a data scientist is a relatively simple task. It is not. At the bare minimum, I would mention several educational options that are designed for people trying to become data scientists. One such an option is Thinkful (I’m a mentor at Thinkful). Udacity and Coursera both have data science programs too. The point is that to become a data scientist, you have to study a lot. You might notice a potential contradiction between point 1 above and this paragraph. A short explanation is that becoming a data scientist takes a lot of time and effort. The post “Teach Yourself Programming in Ten Years” which was written in 2001 about programming is relevant in 2017 about data science.
Featured image is based on a photo by Jase Ess on Unsplash
Frequently, training a machine learning model in a single session is impossible. Most commonly, this happens when one needs to update a model with newly obtained observations. The generic term for such an update is “online learning.” In the scikit-learn world, this concept is also known as partial fit. The problem is that some models or their implementations don’t allow for partial fit. Even if the partial fitting is technically possible, the weight assigned to the new observations is may not be under your control. What happens when you re-train a model from scratch, or when the new observations are assigned too high weights? Recently, I stumbled upon an interesting concept of Pseudo-rehearsal that addresses this problem. Citing Matthew Honnibal:
Sometimes you want to fine-tune a pre-trained model to add a new label or correct some specific errors. This can introduce the “catastrophic forgetting” problem. Pseudo-rehearsal is a good solution: use the original model to label examples, and mix them through your fine-tuning updates.
This post is written by Matthew Honnibal from the team behind the excellent Spacy NLP library. This post is valuable in many aspects. First, it demonstrates a simple-to-implement technique. More importantly, it provides the True Name for a problem I encounter from time to time: Catastrophic forgetting.
Featured image is by Flickr user Herr Olsen under CC-by-nc-2.0
I am a pharmacist. I am interested in becoming a data scientist. My > interests are pharmacoeconomics and other areas of health economics. What do I need to study to become a data scientist?
To answer this question, I described how I gradually transformed from a pharmacist to a data scientists by continuous adaptation to the new challenges of my professional career. In the end, I invited anyone to ask personal questions via e-mail (it’s firstname.lastname@example.org). Two days ago, I received a follow-up question:
I would like to know how to learn data science. Would you suggest a master’s degree in analytics? Or is there another way to add “data scientist” label on my resume?
Here’s my answer that will explain why, in my opinion, studying data science won’t give you job security.
Data scientists are real. Data science isn’t.
I think that while “data scientists” are real, “data science” isn’t. We, the data scientists, analyze data using the scientific methods we know and using the tools we mastered. The term “data scientist” was coined about five years ago for the job market. It was meant to help to bring the expertise and the positions together. How else would you explain a person who knows scientific analysis, machine learning, writes computer code and isn’t too an abstract thinker to understand the business need of a company? Before “data scientist,” there was a less catchy “dataist” http://www.dataists.com/. However, “data scientist” sounded better. It is only after the “data scientist” became a reality, people started searching for “data science.” In the future, data science may become a scientific field, similar to statistics. Currently, though, it is not mature enough. Right now, data science is an attempt to merge different disciplines to answer practical questions. Sometimes, this attempt is successful, which makes my life and the lives of many my colleagues so exciting.
One standard feature of most if not all, the data science tasks is the requirement to understand the underlying domain. A data scientist in a cyber security team needs to have an understanding of data security, a bioinformatician needs to understand the biological processes, and a data scientist in a financial institution needs to know how money works.
That is why, career-wise, I think that the best strategy is to study an applied field that requires data-intense solutions. By doing so, you will learn how to use the various data analysis techniques. More importantly, you will also learn how to conduct a complicated research, and how the analysis and the underlying domain interact. Then, one of the two alternatives will happen. You will either specialize in your domain and will become an expert; or, you will switch between several domains and will learn to build bridges between the domains and the tools. Both paths are valuable. I took the second path, and it looks like most of the today’s data scientists took that route too. However, sometimes, I am jealous with the specialization I could have gained had I not left computational chemistry about ten years ago.
Who can use the “data scientist” title?
Who can use the “data scientist” title? I started presenting myself as a “data scientist and algorithm developer” not because I passed some licensing exams, or had a diploma. I did so because I was developing algorithms to answer data-intense questions. Saying “I’m a data scientist” is like saying “I’m an expert,” or “I’m an analyst,” or “I’m a manager.” If you feel comfortable enough calling yourself so, and if you can defend this title before your peers, do so. Out of the six data scientists in my current team, we have a pharmacist (me), a physicist, an electrical engineer, a CS major, and two mathematicians. We all have advanced degrees (M.A. or Ph.D.), but none of us had any formal “data science” training. I think that the many existing data science courses and programs are only good for people with deep domain knowledge who need to learn the data tools. Managers can benefit from these courses too. However, by taking such a program alone, you will lack the experience in scientific methodology, which is central to any data research project. Such a program will not provide you the computer science knowledge and expertise to make you a good data engineer. You might end up a mediocre Python or R programmer who can fiddle with the parameters of various machine learning libraries, one of the many. Sometimes it’s good enough. Frequently, it’s not.
You might end up a mediocre Python or R programmer who can fiddle with the parameters of various machine learning libraries, one of the many. Sometimes it’s good enough. Frequently, it’s not.
Lessons from the past
When I started my Ph.D. (in 2001), bioinformatics was HUGE. Many companies had bioinformatics departments that consisted of dozens, sometimes, hundreds of people. Every university in Israel (where I live), had a bioinformatics program. I knew at least five bioinformatics startups in my geographic area. Where is it now? What do these bioinformaticians do? I don’t know any bioinformatician who kept their job description. Most of those who I know transformed into data science, some became managers. Others work as governmental clerks.
Existing tools like Tableau have already sweated much of the complexity out of the once-very-hard task of data visualization, said Raghuram. And there are more higher-level tools on the way … that will improve workflow and automate how data interpretations are presented. “That’s the sort of automation that eliminates the need for data scientists to a large degree,” … And as the technology solves more of these problems, there will also be a lot more human job candidates from the 100 graduate programs worldwide dedicated to churning out data scientists Supply, meet demand. And bye-bye perks.
My point is, you have to be versatile and expert. The best way to become one isn’t to take a crash course but to solve hard problems, preferably, under supervision. Usually, you do so by obtaining an advanced degree. By completing an advanced degree, you learn, you learn to learn, and you prove to yourself and your potential employees that you’re capable of bridging the knowledge gaps that will always be there. That is why is why I advocate obtaining a degree in an existing field, keeping the data science as a tool, not a goal.
I might be wrong.
Giving advice is easy. Living the life is not. The path I’m advocating for worked for me. I might be completely wrong here.
I may be completely wrong about data science not being a mature scientific field. For example, deep learning may be the defining concept of data science as a scientific field on its own.
Credits: The crowd image is by Flicker user Amy West. Hilary Mason's photo is from her site https://hilarymason.com/about/